Wheat suffers yield losses in soils with high bacterial diversity

  • 05
  • SEP
  • 2016

Crops in the field are engaged in constant battle with disease-causing soil microbes. When plant pathogens mount a successful attack, harvests are smaller, and so to improve food security, scientists are looking for ways to tackle problem diseases.

A recent study revealed that decreased biodiversity of Pseudomonas, a genus of soil bacteria, is associated with a reduced severity of the fungal disease ‘take-all’ in second year wheat. The work revealed that disease incidence was linked to the wheat variety grown in the first year, and that this also had a profound effect on Pseudomonas species community structure.  

Now researchers have found that the useful activity of Pseudomonas strains that suppress take-all disease is severely reduced when additional Pseudomonas strains are present.

Scientists at the University of Oxford and Rothamsted Research, which receives strategic funding from the BBSRC, carried out the work with support from Defra. They published their findings last month in the journal Scientific Reports.

In a series of experiments, the scientists probed the interaction between the beneficial strains of Pseudomonas and other Pseudomonas bacteria isolated from the same field. They compared soil from plots on which wheat was grown for two consecutive years. It was found that if the first year’s wheat variety resulted in lower take-all disease in the second year, then the Pseudomonas strains present in these plots had lower biodiversity. By contrast, where the wheat variety in the first year resulted in more serious take-all disease in year two with reduced grain yields, Pseudomonas strains were more diverse.

To explore this further, the researchers looked at various strains of Pseudomonas grown either separately or together in the lab. Particular strains of Pseudomonas when grown in isolation, could prevent the spread of the take-all pathogen in a Petri dish. But when multiple strains of Pseudomonas were tested together, the ability to inhibit the pathogen was lost.

Fighting amongst the strains of soil bacteria may reduce their useful properties when biodiversity is high. In this situation, a high biodiversity of soil microbes can be bad for crop yields.

Dr Zia Mehrabi, lead author of the report, said, “For millennia humans have made our crops less and less resilient to pests and pathogens.  How we re-engineer agriculture to combat these pests and pathogens remains a major challenge. Our study shows how getting a better handle on soil biology is a key piece of that pie.”

Dr Tim Mauchline at Rothamsted Research said, “In nature, we normally associate increased biodiversity with microbial plant disease suppression, and so it is fascinating to report the opposite here, as Pseudomonas biodiversity was negatively associated with take-all suppression. We can postulate that as arable agriculture is a highly managed system it perhaps does not follow the ‘normal’ rules of natural ecosystems”.

About Rothamsted Research
Rothamsted Research is the longest-running agricultural research institute in the world. We work from gene to field with a proud history of ground-breaking discoveries, from crop treatment to crop protection, from statistical interpretation to soils management. Our founders, in 1843, were the pioneers of modern agriculture, and we are known for our imaginative science and our collaborative influence on fresh thinking and farming practices.
Through independent science and innovation, we make significant contributions to improving agri-food systems in the UK and internationally. In terms of the institute’s economic contribution, the cumulative impact of our work in the UK was calculated to exceed £3000 million a year in 20151. Our strength lies in our systems approach, which combines science and strategic research, interdisciplinary teams and partnerships.
Rothamsted is also home to three unique resources. These National Capabilities are open to researchers from all over the world: The Long-Term Experiments, Rothamsted Insect Survey and the North Wyke Farm Platform.
We are strategically funded by the Biotechnology and Biological Sciences Research Council (BBSRC), with additional support from other national and international funding streams, and from industry. We are also supported by the Lawes Agricultural Trust (LAT).
For more information, visit; Twitter @Rothamsted
1Rothamsted Research and the Value of Excellence: A synthesis of the available evidence, by Séan Rickard (Oct 2015)

The Biotechnology and Biological Sciences Research Council is part of UK Research and Innovation, a non-departmental public body funded by a grant-in-aid from the UK government.
BBSRC invests in world-class bioscience research and training on behalf of the UK public. Our aim is to further scientific knowledge, to promote economic growth, wealth and job creation and to improve quality of life in the UK and beyond.
Funded by government, BBSRC invested £469 million in world-class bioscience in 2016-17. We support research and training in universities and strategically funded institutes. BBSRC research and the people we fund are helping society to meet major challenges, including food security, green energy and healthier, longer lives. Our investments underpin important UK economic sectors, such as farming, food, industrial biotechnology and pharmaceuticals.
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About LAT
The Lawes Agricultural Trust, established in 1889 by Sir John Bennet Lawes, supports Rothamsted Research’s national and international agricultural science through the provision of land, facilities and funding. LAT, a charitable trust, owns the estates at Harpenden and Broom's Barn, including many of the buildings used by Rothamsted Research. LAT provides an annual research grant to the Director, accommodation for nearly 200 people, and support for fellowships for young scientists from developing countries. LAT also makes capital grants to help modernise facilities at Rothamsted, or invests in new buildings.